This project has grown in size over time. We have divided the project into multiple workstreams that are described below.
The mission of this workstream is to develop an easy to use visual interface for scientists to better understand and compare drug interactions with a particular target.
We need people who have skills or want to develop skills in:
web development
Python
cloud computing
dataframes
Matt Zamora and Paul Zamora
The mission of this workstream is to develop and refine the Delta S Prime algorithm and promote it as a viable analytical method for drug development pipelines.
We need people who have skills or want to develop skills in:
Algorithms
Mathematics
Data science
Bioinformatics
Matt Zamora and Paul Zamora
The mission of this workstream is to perform an exploratory expedition of other cancers where the delta S prime can be applied in a beneficial way.
We are looking for motivated high school students with a strong interest in
Cancer
Rare disease
Bioinformatics
Data science
Matt Zamora, Kangyi Zhou
Work with universisty students on multi-month applied research projects. We've historically taken students form American Universiity
We are looking for motivated undergraduate and graduate students with a strong interest in
Biology
Computer Science
Biomedical Engineering
Bioinformatics
Mathematics
College credits or coursework requirements can be included as part of this internship program.
Ulisses Santamaria and Matthew Zamora
The mission of this workstream is to support the researchers by writing grants or networking with funders for the NF working group.
We need people who have skills or wish to develop their skills in the following subjects
Science communication
Marketing
Writing
Networking
Alex Sathler, Ulisses Santamaria
The mission of this workstream is to support the researchers by creating easy to understand and convenient documentation for the workstreams involved in the NF Working group.
We need people who have skills or wish to develop their skills in the following subject
Google sites (this site)
Jupyter notebooks
Databases
Library science
Data management
Archiving
Ulisses Santamaria
The mission of this workstream is to support the researchers by creating easy to understand and convenient visualization for data based on alleles and genetic information.
We need people who have skills or wish to develop their skills in the following subject
heatmapping
github
streamlit
data visualization
Michael Munchow & Todd
The mission of this workstream is to support the researchers by creating easy to understand and convenient ontology system for data we are using for the S-Prime algorithm.
We need people who have skills or wish to develop their skills in the following subject
data science
language processing
Matt Zamora & Don